Ppi_g43758


Description : component *(FES1) of FRI-C transcription effector complex & original description: none


Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g43758

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00086540 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 38... 0.05 OrthoFinder output from all 47 species
Adi_g020080 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Adi_g086845 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Als_g27332 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Aob_g22679 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Aop_g08771 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22257.t1 Aspi01Gene22257 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Cba_g01885 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Ceric.09G003600.1 Ceric.09G003600 component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Ceric.20G066500.1 Ceric.20G066500 component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Ceric.20G084000.1 Ceric.20G084000 component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ceric.29G050700.1 Ceric.29G050700 component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Dac_g06929 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Dcu_g07178 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Ehy_g16623 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ehy_g18865 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Gb_19122 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Gb_26302 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Lfl_g05738 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Lfl_g29094 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
MA_111475g0010 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.02 OrthoFinder output from all 47 species
MA_321233g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8408g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g05400.1 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Msp_g19470 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ore_g08246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011981 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Sam_g30142 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Solyc06g069440.3.1 Solyc06g069440 Zinc finger CCCH domain-containing protein 38... 0.03 OrthoFinder output from all 47 species
Spa_g17866 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Spa_g41981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10851 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Tin_g20286 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Tin_g26553 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Zm00001e040314_P001 Zm00001e040314 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!