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Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g012573 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014847 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g018230 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g018518 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g021711 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054668 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g106782 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g05826 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05828 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07452 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19837 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21523 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05741 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06380 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06894 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07076 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18793 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26690 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30602 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g12298 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03222 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07597 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g09010 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09161 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g20188 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21763 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g25160 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g29116 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0092.g042984 | No alias | not classified & original description: CDS=1-3306 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0131.g049164 | No alias | not classified & original description: CDS=1-2763 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060258 | No alias | not classified & original description: CDS=1-1893 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0345.g065805 | No alias | not classified & original description: CDS=1-2679 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0469.g072874 | CRR22 | not classified & original description: CDS=1-1206 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1399.g102577 | No alias | not classified & original description: CDS=1-951 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05283 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05328 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07638 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07775 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67235 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67244 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67756 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75380 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75406 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.08G045700.1 | Ceric.08G045700 | not classified & original description: pacid=50638513... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.15G051000.1 | Ceric.15G051000 | not classified & original description: pacid=50640878... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G076300.1 | Ceric.15G076300 | not classified & original description: pacid=50639367... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z015700.1 | VAC1, ECB2,... | not classified & original description: pacid=50604577... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G027500.1 | Ceric.21G027500 | not classified & original description: pacid=50603039... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.23G007100.1 | Ceric.23G007100 | not classified & original description: pacid=50611480... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G030400.1 | Ceric.26G030400 | not classified & original description: pacid=50599909... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G083700.1 | Ceric.29G083700 | not classified & original description: pacid=50625623... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.37G043200.1 | Ceric.37G043200 | not classified & original description: pacid=50616612... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G026000.1 | Ceric.39G026000 | not classified & original description: pacid=50583375... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g15522 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g17090 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g22240 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g40274 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02401 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g06991 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g13612 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g18161 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g18170 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g19719 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23952 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g24777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g47763 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51244 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51784 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g14206 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30749 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g47068 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06184 | DOT4 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06269 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03212 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05241 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g45899 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g47310 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g17001 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g18405 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19389 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27631 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g39340 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g05641 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g28478 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02232 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03867 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11351 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18939 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000390 | No alias | not classified & original description: CDS=1-1221 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004387 | No alias | not classified & original description: CDS=1-2973 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007662 | CRR22 | not classified & original description: CDS=517-2514 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07064 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07955 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12602 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16270 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17490 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g23060 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24539 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g25360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30193 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40247 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05090 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09114 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22163 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23501 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54985 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56098 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02887 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08736 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09995 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10096 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g29783 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g37478 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g40520 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 175 | 222 |
| IPR002885 | Pentatricopeptide_repeat | 76 | 121 |
| IPR002885 | Pentatricopeptide_repeat | 290 | 338 |
| IPR002885 | Pentatricopeptide_repeat | 526 | 549 |
| IPR002885 | Pentatricopeptide_repeat | 597 | 617 |
| IPR002885 | Pentatricopeptide_repeat | 497 | 517 |
| IPR002885 | Pentatricopeptide_repeat | 379 | 400 |
| IPR002885 | Pentatricopeptide_repeat | 409 | 436 |
| IPR002885 | Pentatricopeptide_repeat | 660 | 685 |
| No external refs found! |