Ppi_g43089 (CDF2)

Aliases : CDF2

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g43089

Target	Alias	Description	ECC score	Gene Family Method
AT1G47655	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT3G21270	ADOF2, DOF2	DOF zinc finger protein 2	0.01	OrthoFinder output from all 47 species
Adi_g012792	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g058754	CDF1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g074653	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g06838	DAG1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene43236.t1	TMO6, Aspi01Gene43236	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene66325.t1	OBP3, Aspi01Gene66325	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g19275	CDF3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g26303	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g39110	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g72531	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G044500.1	Ceric.03G044500	transcription factor *(DOF) & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g19391	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g25853	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12302	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01016887001	ADOF1, DOF1	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
LOC_Os04g58190.1	LOC_Os04g58190	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os07g13260.1	OBP3, LOC_Os07g13260	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Len_g10091	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
MA_123810g0010	OBP4	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species
Ore_g33923	OBP1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g05506	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g06642	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007584	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1335	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008681	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=453-2084	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870	TMO6	transcription factor *(DOF) & original description: CDS=1-1464	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020125	No alias	transcription factor *(DOF) & original description: CDS=124-2595	0.02	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Tin_g14068	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e006527_P001	Zm00001e006527	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species
Zm00001e041944_P001	Zm00001e041944	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
MF	GO:0051087	chaperone binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
MF	GO:0060590	ATPase regulator activity	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	144	200

External Links

No external refs found!

Ppi_g43089 (CDF2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation