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  5. Ppi_g42667

Ppi_g42667 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g42667
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00104050 evm_27.TU.AmTr_v1... Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris 0.02 OrthoFinder output from all 47 species
Als_g31640 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46335 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene44628.t1 RUB1, ATRUB1,... RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cre07.g322100 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g07346 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50341 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28672 RUB1, ATRUB1, NEDD8 ubiquitin-fold protein (RUB) 0.03 OrthoFinder output from all 47 species
Len_g05009 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22941 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23474 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g28234 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_454078g0010 UBQ11 Polyubiquitin (Fragment) OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
MA_9420337g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Nbi_g18819 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_11430V3.1 UBQ14, Pp3c4_11430 polyubiquitin 10 0.02 OrthoFinder output from all 47 species
Ppi_g47816 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 1 60
IPR000626 Ubiquitin-like_dom 65 136
No external refs found!