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  5. LOC_Os12g02350.1

LOC_Os12g02350.1


Description : RING-H2 finger protein ATL74 OS=Arabidopsis thaliana (sp|q9lzv8|atl74_arath : 112.0)


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000003 (LandPlants) Phylogenetic Tree(s): OG_02_0000003_tree ,
OG_03_0000216 (SeedPlants) Phylogenetic Tree(s): OG_03_0000216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g02350.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT3G18930 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cre11.g476250 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os02g36300.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_105610g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c13_4710V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c19_14050V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c9_3390V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc01g096650.3.1 No alias Putative RING-H2 finger protein ATL69 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
AT3G18930 No alias RING/U-box superfamily protein 0.03 LandPlants
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Pp3c21_17280V3.1 No alias RING/U-box superfamily protein 0.02 LandPlants
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.05 LandPlants
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
MA_25345g0010 No alias RING-H2-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 112 155
No external refs found!