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Aliases : RVE2, CIR1
Description : transcription factor *(REVEILLE) & original description: none
Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00261430 | evm_27.TU.AmTr_v1... | Multi-process regulation.circadian clock.evening element... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00001p00272270 | LHY1, LHY,... | Multi-process regulation.circadian clock.core oscillator... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G01060 | LHY1, LHY | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G01520 | No alias | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G46830 | CCA1 | circadian clock associated 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G09600 | No alias | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G17300 | RVE1 | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035852 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07748 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12530 | RVE2, CIR1 | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g35636 | No alias | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15171 | RVE1 | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g23846 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32554 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g49065 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g32805 | LHY1, LHY | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g37981 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01893.t1 | Aspi01Gene01893 | transcription factor *(REVEILLE) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene08575.t1 | Aspi01Gene08575 | circadian clock factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene31228.t1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene31403.t1 | RVE1, Aspi01Gene31403 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene62087.t1 | Aspi01Gene62087 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000277 | No alias | circadian clock factor *(REVEILLE) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g008971 | RVE1 | transcription factor *(REVEILLE) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0042.g026930 | CCA1 | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035858 | RVE1 | transcription factor *(REVEILLE) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G032400.1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g514400 | RVE2, CIR1 | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g06441 | No alias | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08959 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025544001 | No alias | Multi-process regulation.circadian clock.evening element... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027456001 | CCA1 | Multi-process regulation.circadian clock.core oscillator... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g45670.1 | LOC_Os02g45670 | transcription factor (MYB-related). REVEILLE circadian... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g01670.1 | LOC_Os06g01670 | transcription factor (MYB-related). REVEILLE circadian... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g51260.1 | RVE2, CIR1,... | transcription factor (MYB-related) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g06110.3 | LHY1, LHY, LOC_Os08g06110 | transcription factor (MYB-related). circadian clock core... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11537 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g30981 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10289482g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14125 | RVE2, CIR1 | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26311 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18757 | No alias | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15122 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15968 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0034.g011198 | No alias | circadian clock factor *(REVEILLE) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12578 | No alias | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51660 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo166821 | No alias | Multi-process regulation.circadian clock.core oscillator... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g098320.4.1 | RVE1, Solyc03g098320 | transcription factor (MYB-related) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g005080.3.1 | LHY1, LHY, Solyc10g005080 | transcription factor (MYB-related). circadian clock core... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g084370.3.1 | Solyc10g084370 | transcription factor (MYB-related). REVEILLE circadian... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g46612 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g49823 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013333_P002 | RVE2, CIR1,... | transcription factor (MYB-related) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016853_P001 | Zm00001e016853 | transcription factor (MYB-related) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021724_P005 | LHY1, LHY, Zm00001e021724 | transcription factor (MYB-related). circadian clock core... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023232_P002 | Zm00001e023232 | transcription factor (MYB-related). REVEILLE circadian... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e040217_P001 | LHY1, LHY, Zm00001e040217 | circadian clock core oscillator protein (LHY|CCA1) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| MF | GO:0004743 | pyruvate kinase activity | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0030955 | potassium ion binding | IEP | HCCA |
| MF | GO:0031420 | alkali metal ion binding | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 55 | 98 |
| No external refs found! |