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  5. Ppi_g41948

Ppi_g41948


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g41948

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00050160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
Adi_g057776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.02 OrthoFinder output from all 47 species
LOC_Os03g53630.1 LOC_Os03g53630 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g59510.1 LOC_Os04g59510 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g13351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 570 620
IPR019787 Znf_PHD-finger 640 681
IPR008395 Agenet-like_dom 10 93
No external refs found!