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  5. Ppi_g41943

Ppi_g41943 (TBL13)


Aliases : TBL13

Description : not classified & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g41943

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00162030 TBR Protein trichome birefringence OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G70230 TBL27 TRICHOME BIREFRINGENCE-LIKE 27 0.02 OrthoFinder output from all 47 species
AT3G02440 TBL20 TRICHOME BIREFRINGENCE-LIKE 20 0.02 OrthoFinder output from all 47 species
AT5G19160 TBL11 TRICHOME BIREFRINGENCE-LIKE 11 0.02 OrthoFinder output from all 47 species
Adi_g001847 TBL21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06983 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17899.t1 TBL6, Aspi01Gene17899 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17914.t1 TBL5, Aspi01Gene17914 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26562.t1 TBL16, Aspi01Gene26562 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26562.t2 Aspi01Gene26562 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30810.t2 TBL25, Aspi01Gene30810 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64222.t1 TBL14, Aspi01Gene64222 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64230.t1 TBL14, Aspi01Gene64230 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08321 TBL13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G027400.1 TBL12, Ceric.11G027400 not classified & original description: pacid=50596610... 0.03 OrthoFinder output from all 47 species
Ceric.27G011100.1 TBL13, Ceric.27G011100 not classified & original description: pacid=50604886... 0.03 OrthoFinder output from all 47 species
Dac_g20904 TBL14 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g01764 TBL7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g20773 TBL12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09995 TBR Protein trichome birefringence OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os03g60350.1 TBL33, LOC_Os03g60350 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
LOC_Os06g44900.1 TBL5, LOC_Os06g44900 Protein trichome birefringence-like 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g01731 TBL21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03254 TBL10 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Msp_g16153 TBL14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47835 TBL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26795 TBL8 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023626 No alias not classified & original description: CDS=1-537 0.02 OrthoFinder output from all 47 species
Sam_g18097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g068440.2.1 TBL39, Solyc01g068440 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g106370.3.1 TBL12, Solyc01g106370 Protein trichome birefringence-like 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc02g082940.3.1 TBL34, Solyc02g082940 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Solyc10g076400.2.1 TBL34, Solyc10g076400 xylan O-acetyltransferase (XOAT) 0.01 OrthoFinder output from all 47 species
Spa_g41574 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Zm00001e016007_P001 TBR, Zm00001e016007 Protein trichome birefringence OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e035942_P001 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025846 TBL_N 111 164
IPR026057 PC-Esterase 165 452
No external refs found!