Description : recombinase *(RecA) & original description: none
Gene families : OG0001867 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001867_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aev_g12096 | |
Cluster | HCCA: Cluster_45 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00092p00136000 | evm_27.TU.AmTr_v1... | Cell cycle.organelle machineries.DNA replication.genome... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g43850.1 | LOC_Os03g43850 | recombinase (RecA) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g01019 | No alias | recombinase *(RecA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_519118g0010 | No alias | recombinase (RecA) | 0.02 | OrthoFinder output from all 47 species | |
MA_69432g0010 | No alias | DNA repair protein recA homolog 1, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
Mp6g18550.1 | No alias | recombinase (RecA) | 0.01 | OrthoFinder output from all 47 species | |
Ore_g19263 | No alias | recombinase *(RecA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g01304 | No alias | recombinase *(RecA) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
MF | GO:0050897 | cobalt ion binding | IEP | HCCA |
BP | GO:0051202 | phytochromobilin metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013765 | DNA_recomb/repair_RecA | 97 | 358 |
No external refs found! |