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  5. Ppi_g41358

Ppi_g41358


Description : histone demethylase *(KDM3) & original description: none


Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g41358

Target Alias Description ECC score Gene Family Method Actions
Adi_g015324 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113607 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51504 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g06688 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20744 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41882 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10027 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12082 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35782 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10189726g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_103030g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
Sam_g29690 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51855 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48212 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010541_P001 Zm00001e010541 histone demethylase (KDM3) 0.02 OrthoFinder output from all 47 species
Zm00001e023535_P001 Zm00001e023535 histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Zm00001e025393_P001 Zm00001e025393 histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 1465 1564
No external refs found!