LOC_Os11g48090.5


Description : component MED34 of MEDIATOR transcription co-activator complex


Gene families : OG_01_0000499 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000499_tree ,
OG_02_0008914 (LandPlants) Phylogenetic Tree(s): OG_02_0008914_tree ,
OG_03_0010564 (SeedPlants) Phylogenetic Tree(s): OG_03_0010564_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g48090.5
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00224070 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
GSVIVT01031213001 No alias ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
MA_10429752g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g02390.1 No alias Mediator of RNA polymerase II transcription subunit 34... 0.03 Archaeplastida
Pp3c5_19440V3.1 No alias RECQ helicase L2 0.02 Archaeplastida
Zm00001e002693_P002 No alias component MED34 of MEDIATOR transcription co-activator complex 0.03 Archaeplastida
Zm00001e016051_P001 No alias ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis... 0.04 Archaeplastida
AMTR_s00048p00224070 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 LandPlants
Zm00001e002693_P002 No alias component MED34 of MEDIATOR transcription co-activator complex 0.03 LandPlants
AMTR_s00048p00224070 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 SeedPlants
Zm00001e002693_P002 No alias component MED34 of MEDIATOR transcription co-activator complex 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 92 259
IPR001650 Helicase_C 305 407
IPR032284 RecQ_Zn-bd 420 475
IPR002121 HRDC_dom 609 669
No external refs found!