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  5. LOC_Os11g47970.1

LOC_Os11g47970.1


Description : ATP-dependent activase involved in RuBisCo regulation


Gene families : OG_01_0001377 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001377_tree ,
OG_02_0002886 (LandPlants) Phylogenetic Tree(s): OG_02_0002886_tree ,
OG_03_0003838 (SeedPlants) Phylogenetic Tree(s): OG_03_0003838_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g47970.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00255830 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.07 Archaeplastida
AMTR_s00019p00240690 evm_27.TU.AmTr_v1... Ribulose bisphosphate carboxylase/oxygenase activase,... 0.02 Archaeplastida
AT1G73110 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT2G39730 RCA rubisco activase 0.19 Archaeplastida
Cpa|evm.model.tig00020848.91 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 Archaeplastida
Cre04.g229300 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.08 Archaeplastida
GSVIVT01016062001 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 Archaeplastida
GSVIVT01016501001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 Archaeplastida
GSVIVT01024910001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.13 Archaeplastida
GSVIVT01034123001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.12 Archaeplastida
Gb_37968 No alias ATP-dependent activase involved in RuBisCo regulation 0.07 Archaeplastida
MA_10428784g0010 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.05 Archaeplastida
MA_10433855g0010 No alias ATP-dependent activase involved in RuBisCo regulation 0.08 Archaeplastida
MA_379291g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp2g04090.1 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.02 Archaeplastida
Mp3g03990.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.08 Archaeplastida
Pp3c13_13170V3.1 No alias rubisco activase 0.07 Archaeplastida
Pp3c15_12410V3.1 No alias rubisco activase 0.06 Archaeplastida
Pp3c22_12960V3.1 No alias rubisco activase 0.04 Archaeplastida
Pp3c4_22100V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
Pp3c9_5280V3.1 No alias rubisco activase 0.01 Archaeplastida
Pp3c9_5310V3.1 No alias rubisco activase 0.09 Archaeplastida
Smo268623 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.09 Archaeplastida
Smo82367 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.08 Archaeplastida
Solyc03g117850.4.1 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.06 Archaeplastida
Solyc09g011080.3.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.02 Archaeplastida
Solyc10g086580.2.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.12 Archaeplastida
Zm00001e020928_P001 No alias ATP-dependent activase involved in RuBisCo regulation 0.1 Archaeplastida
AMTR_s00012p00255830 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.07 LandPlants
AT2G39730 RCA rubisco activase 0.17 LandPlants
GSVIVT01016501001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 LandPlants
GSVIVT01024910001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.1 LandPlants
GSVIVT01034123001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.1 LandPlants
Gb_04109 No alias ATP-dependent activase involved in RuBisCo regulation 0.02 LandPlants
Gb_37968 No alias ATP-dependent activase involved in RuBisCo regulation 0.06 LandPlants
MA_10433855g0010 No alias ATP-dependent activase involved in RuBisCo regulation 0.06 LandPlants
Mp3g03990.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.06 LandPlants
Pp3c13_13170V3.1 No alias rubisco activase 0.06 LandPlants
Pp3c15_12410V3.1 No alias rubisco activase 0.06 LandPlants
Pp3c22_12960V3.1 No alias rubisco activase 0.03 LandPlants
Pp3c9_5280V3.1 No alias rubisco activase 0.01 LandPlants
Pp3c9_5310V3.1 No alias rubisco activase 0.09 LandPlants
Smo268623 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.07 LandPlants
Solyc09g011080.3.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.02 LandPlants
Solyc10g086580.2.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.12 LandPlants
Zm00001e020928_P001 No alias ATP-dependent activase involved in RuBisCo regulation 0.1 LandPlants
AMTR_s00012p00255830 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 SeedPlants
AT2G39730 RCA rubisco activase 0.16 SeedPlants
GSVIVT01016501001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 SeedPlants
GSVIVT01024910001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.1 SeedPlants
GSVIVT01034123001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.1 SeedPlants
Gb_04109 No alias ATP-dependent activase involved in RuBisCo regulation 0.02 SeedPlants
Gb_37968 No alias ATP-dependent activase involved in RuBisCo regulation 0.06 SeedPlants
MA_10433855g0010 No alias ATP-dependent activase involved in RuBisCo regulation 0.06 SeedPlants
Solyc09g011080.3.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.02 SeedPlants
Solyc10g086580.2.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.11 SeedPlants
Zm00001e020928_P001 No alias ATP-dependent activase involved in RuBisCo regulation 0.1 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 192 333
No external refs found!