1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g40752

Ppi_g40752


Description : not classified & original description: none


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g40752
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
Aev_g02287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010769 No alias not classified & original description: CDS=270-1544 0.03 OrthoFinder output from all 47 species
Ceric.25G071400.1 Ceric.25G071400 not classified & original description: pacid=50593370... 0.04 OrthoFinder output from all 47 species
Ceric.27G020300.1 Ceric.27G020300 not classified & original description: pacid=50605628... 0.02 OrthoFinder output from all 47 species
Dcu_g02839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000825 No alias not classified & original description: CDS=373-1662 0.02 OrthoFinder output from all 47 species
Sam_g06999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028338_P001 Zm00001e028338 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 13 79
IPR000504 RRM_dom 101 161
IPR000504 RRM_dom 302 359
No external refs found!