Ppi_g39242


Description : not classified & original description: none


Gene families : OG0002155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002155_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g39242

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00322p00016350 evm_27.TU.AmTr_v1... Stress-response A/B barrel domain-containing protein UP3... 0.03 OrthoFinder output from all 47 species
Aev_g00736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10394 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.24G007900.1 Ceric.24G007900 not classified & original description: pacid=50628966... 0.03 OrthoFinder output from all 47 species
Dde_g06353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g06289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g12660.1 No alias Stress-response A/B barrel domain-containing protein UP3... 0.03 OrthoFinder output from all 47 species
Ore_g08113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g041490.3.1 Solyc07g041490 Stress-response A/B barrel domain-containing protein UP3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013097 Dabb 116 209
IPR013097 Dabb 226 317
No external refs found!