Ppi_g39058


Description : not classified & original description: none


Gene families : OG0002723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002723_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g39058

Target Alias Description ECC score Gene Family Method Actions
Adi_g007225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0074.g037460 No alias not classified & original description: CDS=237-1853 0.02 OrthoFinder output from all 47 species
Ceric.02G078400.1 Ceric.02G078400 not classified & original description: pacid=50584041... 0.04 OrthoFinder output from all 47 species
Ceric.26G050800.1 Ceric.26G050800 not classified & original description: pacid=50599723... 0.03 OrthoFinder output from all 47 species
Ceric.36G005600.1 Ceric.36G005600 not classified & original description: pacid=50567884... 0.03 OrthoFinder output from all 47 species
Dac_g15385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12746 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g13817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_105966g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g13525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009479 No alias not classified & original description: CDS=125-1765 0.03 OrthoFinder output from all 47 species
Sam_g13481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!