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  5. Ppi_g38967

Ppi_g38967


Description : plastidial splicing factor *(PDM3) & original description: none


Gene families : OG0008153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g38967

Target Alias Description ECC score Gene Family Method Actions
Dac_g06633 No alias plastidial splicing factor *(PDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01199 No alias plastidial splicing factor *(PDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40651 No alias plastidial splicing factor *(PDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019387_P001 Zm00001e019387 Pentatricopeptide repeat-containing protein At5g39980,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 252 296
IPR002885 Pentatricopeptide_repeat 146 193
IPR002885 Pentatricopeptide_repeat 221 249
IPR002885 Pentatricopeptide_repeat 65 125
No external refs found!