Zm00001d030862 (GRMZM2G039112)


Aliases : GRMZM2G039112

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein ?//CONTAINS one AP2 domain. There are 12 members in this subfamily including RAP2.11.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d030862

Target Alias Description ECC score Gene Family Method Actions
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G40220 ABI4, SAN5,... Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.02 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01001089001 No alias No description available 0.02 Gene family
GSVIVT01005747001 No alias No description available 0.03 Gene family
GSVIVT01028315001 No alias No description available 0.05 Gene family
GSVIVT01035852001 No alias No description available 0.05 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.03 Gene family
LOC_Os04g34970 Os04g0429050 No description available 0.03 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os06g11940 Os06g0223100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_104230g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_10430231g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_162045g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_180106g0010 No alias No description available 0.03 Gene family
MA_24801g0010 No alias No description available 0.03 Gene family
MA_269802g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_27642g0010 No alias No description available 0.03 Gene family
MA_33689g0010 No alias No description available 0.03 Gene family
MA_446533g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_959784g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo104978 PACid_15415926 No description available 0.05 Gene family
Smo104980 PACid_15415938 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.03 Gene family
Solyc01g090340.2.1 Solyc01g090340.2 No description available 0.03 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.02 Gene family
Solyc03g118190.3.1 Solyc03g118190.3 No description available 0.03 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc12g056590.2.1 Solyc12g056590.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d020043 GRMZM2G363052 No description available 0.04 Gene family
Zm00001d035835 GRMZM2G135452 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d051350 GRMZM2G048621 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 60 109
No external refs found!