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Description : component *(eS25) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0000493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000493_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g37027 | |
| Cluster | HCCA: Cluster_385 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00031p00169220 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G21580 | No alias | Ribosomal protein S25 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g103799 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g43912 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g00339 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g47329 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001572 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g73606 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000974001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_29693 | No alias | component RPS25 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g44480.1 | LOC_Os08g44480 | component RPS25 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g39540.1 | LOC_Os09g39540 | component RPS25 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g05562.1 | LOC_Os11g05562 | component RPS25 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| MA_104137g0010 | No alias | component RPS25 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22394 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g54571 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g20177 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g42051 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g42651 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003921_P001 | Zm00001e003921 | component RPS25 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019589_P001 | Zm00001e019589 | component RPS25 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022058_P001 | Zm00001e022058 | component RPS25 of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | HCCA |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
| BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
| BP | GO:0009060 | aerobic respiration | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | HCCA |
| BP | GO:0019646 | aerobic electron transport chain | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| BP | GO:0022904 | respiratory electron transport chain | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| CC | GO:0045275 | respiratory chain complex III | IEP | HCCA |
| BP | GO:0045333 | cellular respiration | IEP | HCCA |
| BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
| BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| CC | GO:0070069 | cytochrome complex | IEP | HCCA |
| CC | GO:0098803 | respiratory chain complex | IEP | HCCA |
| MF | GO:0120227 | acyl-CoA binding | IEP | HCCA |
| MF | GO:1901567 | fatty acid derivative binding | IEP | HCCA |
| MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
| CC | GO:1902495 | transmembrane transporter complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| CC | GO:1990351 | transporter complex | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004977 | Ribosomal_S25 | 6 | 103 |
| No external refs found! |