Aliases : ATH-A, CESA2, ATCESA2
Description : catalytic component *(CesA) of cellulose synthase complex & original description: none
Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00048p00116140 | ATCSLD3, KJK,... | Cell wall.hemicellulose.heteromannan.synthesis.mannan... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00103p00124340 | IXR1, CEV1,... | Cell wall.cellulose.synthesis.cellulose synthase complex... | 0.03 | OrthoFinder output from all 47 species | |
AT5G16910 | ATCSLD2, CSLD2 | cellulose-synthase like D2 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g040650 | IXR1, CEV1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g42384 | MUR10, ATCESA7,... | glycosyltransferase *(CSLB/CSLH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g27117 | IXR1, CEV1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g08978 | ATH-A, CESA2, ATCESA2 | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01006760001 | ATCSLE1, CSLE1 | Cellulose synthase-like protein E6 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01013057001 | ATCSLD2, CSLD2 | Cell wall.hemicellulose.heteromannan.synthesis.mannan... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g59340.1 | IXR1, CEV1,... | catalytic component CesA of cellulose synthase complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g42750.1 | ATCSLD3, KJK,... | mannan synthase (CSLD) | 0.02 | OrthoFinder output from all 47 species | |
MA_10435322g0010 | AtCESA1, RSW1, CESA1 | Probable cellulose synthase A catalytic subunit 2... | 0.02 | OrthoFinder output from all 47 species | |
MA_195271g0010 | ATCSLE1, CSLE1 | Cellulose synthase-like protein E6 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
MA_9184g0010 | MUR10, ATCESA7,... | Cellulose synthase A catalytic subunit 7 [UDP-forming]... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g10476 | MUR10, ATCESA7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo73698 | AtCESA1, RSW1, CESA1 | Cell wall.cellulose.synthesis.cellulose synthase complex... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g072240.3.1 | CESA8, LEW2,... | catalytic component CesA of cellulose synthase complex | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g005840.2.1 | MUR10, ATCESA7,... | catalytic component CesA of cellulose synthase complex | 0.02 | OrthoFinder output from all 47 species | |
Solyc08g076320.3.1 | ATCSLD3, KJK,... | mannan synthase (CSLD) | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g072820.4.1 | CESA4, NWS2,... | catalytic component CesA of cellulose synthase complex | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22180 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g26389 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06677 | AtCESA1, RSW1, CESA1 | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g21851 | CESA6, PRC1, IXR2, E112 | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e002486_P001 | ATCSLD3, KJK,... | mannan synthase (CSLD) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e004630_P001 | CESA4, NWS2,... | catalytic component CesA of cellulose synthase complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e009843_P002 | MUR10, ATCESA7,... | catalytic component CesA of cellulose synthase complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019828_P001 | CESA8, LEW2,... | catalytic component CesA of cellulose synthase complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e034187_P001 | MUR10, ATCESA7,... | catalytic component CesA of cellulose synthase complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEA | Interproscan |
BP | GO:0030244 | cellulose biosynthetic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No external refs found! |