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Description : not classified & original description: none
Gene families : OG0001217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001217_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g35752 | |
| Cluster | HCCA: Cluster_142 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00099p00073140 | evm_27.TU.AmTr_v1... | Zinc finger CCCH domain-containing protein 19... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G16485 | No alias | nucleic acid binding;zinc ion binding;DNA binding | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007808 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060536 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g106014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g107366 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19106 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13646 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene58671.t1 | Aspi01Gene58671 | protein factor (NERD) of non-canonical RdDM pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G099900.1 | Ceric.09G099900 | protein factor (NERD) of non-canonical RdDM pathway &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02022 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g05103 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g34780.1 | LOC_Os05g34780 | Zinc finger CCCH domain-containing protein 44... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g36090.1 | LOC_Os09g36090 | protein factor (NERD) of non-canonical RdDM pathway | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g36810.1 | LOC_Os10g36810 | protein factor (NERD) of non-canonical RdDM pathway | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06273 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g35904 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_116694g0010 | No alias | Zinc finger CCCH domain-containing protein 19... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g08690.1 | No alias | protein factor (NERD) of non-canonical RdDM pathway | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g10283 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g34912 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g45316 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010759 | No alias | not classified & original description: CDS=84-1793 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g103250.4.1 | Solyc01g103250 | Uncharacterized protein At5g08430 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g033630.3.1 | Solyc03g033630 | Zinc finger CCCH domain-containing protein 44... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g062220.2.1 | Solyc11g062220 | Zinc finger CCCH domain-containing protein 19... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15744 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g49491 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g43997 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e004378_P003 | Zm00001e004378 | protein factor (NERD) of non-canonical RdDM pathway | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e012555_P003 | Zm00001e012555 | protein factor (NERD) of non-canonical RdDM pathway | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019791_P001 | Zm00001e019791 | protein factor (NERD) of non-canonical RdDM pathway | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e029059_P002 | Zm00001e029059 | protein factor (NERD) of non-canonical RdDM pathway | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |