Zm00001d030518 (GRMZM2G153594)

Aliases : GRMZM2G153594

Description : 27.3.39 RNA.regulation of transcription.AtSR Transcription Factor family Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses. signal responsive 1 (SR1)

Gene families : OG_01_0000629 (Gene family) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d030518
Cluster HCCA cluster: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
AT2G22300 CAMTA3, SR1 signal responsive 1 0.03 Gene family
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.03 Gene family
GSVIVT01004860001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.03 Gene family
GSVIVT01010510001 No alias 30.11 signalling.light Calmodulin-binding transcription... 0.03 Gene family
GSVIVT01017670001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.02 Gene family
LOC_Os03g09100 Os03g0191000 27.3.39 RNA.regulation of transcription.AtSR... 0.02 Gene family
LOC_Os04g31900 Os04g0388500 30.11 signalling.light Calmodulin-binding transcription... 0.04 Gene family
LOC_Os07g43030 Os07g0623100 17.5.3 hormone... 0.03 Gene family
Smo441667 PACid_15409450 No description available 0.04 Gene family
Solyc01g105230.3.1 Solyc01g105230.3 27.3.39 RNA.regulation of transcription.AtSR... 0.04 Gene family
Solyc05g015650.3.1 Solyc05g015650.3 30.11 signalling.light Calmodulin-binding transcription... 0.05 Gene family
Zm00001d042313 GRMZM2G171600 30.11 signalling.light Calmodulin-binding transcription... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002909 IPT_dom 280 358
IPR000048 IQ_motif_EF-hand-BS 701 720
IPR000048 IQ_motif_EF-hand-BS 677 696
No external refs found!