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  5. LOC_Os11g38959.1

LOC_Os11g38959.1


Description : component RPS9 of SSU proteome


Gene families : OG_01_0001616 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001616_tree ,
OG_02_0001469 (LandPlants) Phylogenetic Tree(s): OG_02_0001469_tree ,
OG_03_0001978 (SeedPlants) Phylogenetic Tree(s): OG_03_0001978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g38959.1
Cluster HCCA: Cluster_379

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00256040 evm_27.TU.AmTr_v1... 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT5G15200 No alias Ribosomal protein S4 0.37 Archaeplastida
Cpa|evm.model.tig00000826.24 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Cre08.g359750 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.25 Archaeplastida
GSVIVT01008028001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.12 Archaeplastida
GSVIVT01011384001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.31 Archaeplastida
GSVIVT01020020001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_19294 No alias component RPS9 of SSU proteome 0.04 Archaeplastida
Gb_41315 No alias component RPS9 of SSU proteome 0.18 Archaeplastida
MA_10429805g0030 No alias component RPS9 of SSU proteome 0.16 Archaeplastida
MA_10431745g0020 No alias component RPS9 of SSU proteome 0.1 Archaeplastida
Mp3g00520.1 No alias component RPS9 of SSU proteome 0.34 Archaeplastida
Mp6g10930.1 No alias component RPS9 of SSU proteome 0.26 Archaeplastida
Pp3c12_9190V3.1 No alias Ribosomal protein S4 0.2 Archaeplastida
Pp3c13_19780V3.1 No alias Ribosomal protein S4 0.24 Archaeplastida
Pp3c27_1920V3.1 No alias Ribosomal protein S4 0.03 Archaeplastida
Pp3c3_23720V3.1 No alias Ribosomal protein S4 0.26 Archaeplastida
Pp3c4_15290V3.1 No alias Ribosomal protein S4 0.2 Archaeplastida
Pp3c6_17680V3.1 No alias Ribosomal protein S4 0.18 Archaeplastida
Smo157263 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.16 Archaeplastida
Smo74302 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.15 Archaeplastida
Solyc01g010540.3.1 No alias component RPS9 of SSU proteome 0.22 Archaeplastida
Solyc01g010580.3.1 No alias component RPS9 of SSU proteome 0.14 Archaeplastida
Solyc04g005680.4.1 No alias component RPS9 of SSU proteome 0.27 Archaeplastida
Solyc05g007250.3.1 No alias component RPS9 of SSU proteome 0.4 Archaeplastida
Zm00001e010819_P002 No alias component RPS9 of SSU proteome 0.37 Archaeplastida
Zm00001e018345_P001 No alias component RPS9 of SSU proteome 0.25 Archaeplastida
Zm00001e037961_P002 No alias component RPS9 of SSU proteome 0.25 Archaeplastida
AMTR_s00010p00256040 evm_27.TU.AmTr_v1... 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.04 LandPlants
AT5G15200 No alias Ribosomal protein S4 0.35 LandPlants
GSVIVT01008028001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.11 LandPlants
GSVIVT01011384001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.29 LandPlants
GSVIVT01020020001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.03 LandPlants
Gb_19294 No alias component RPS9 of SSU proteome 0.02 LandPlants
Gb_41315 No alias component RPS9 of SSU proteome 0.17 LandPlants
MA_10429805g0030 No alias component RPS9 of SSU proteome 0.14 LandPlants
MA_10431745g0020 No alias component RPS9 of SSU proteome 0.1 LandPlants
Mp3g00520.1 No alias component RPS9 of SSU proteome 0.32 LandPlants
Mp6g10930.1 No alias component RPS9 of SSU proteome 0.26 LandPlants
Pp3c12_9190V3.1 No alias Ribosomal protein S4 0.19 LandPlants
Pp3c13_19780V3.1 No alias Ribosomal protein S4 0.24 LandPlants
Pp3c27_1920V3.1 No alias Ribosomal protein S4 0.03 LandPlants
Pp3c3_23720V3.1 No alias Ribosomal protein S4 0.23 LandPlants
Pp3c4_15290V3.1 No alias Ribosomal protein S4 0.19 LandPlants
Pp3c6_17680V3.1 No alias Ribosomal protein S4 0.17 LandPlants
Smo157263 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.16 LandPlants
Smo74302 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.15 LandPlants
Solyc01g010540.3.1 No alias component RPS9 of SSU proteome 0.21 LandPlants
Solyc01g010580.3.1 No alias component RPS9 of SSU proteome 0.13 LandPlants
Solyc04g005680.4.1 No alias component RPS9 of SSU proteome 0.25 LandPlants
Solyc05g007250.3.1 No alias component RPS9 of SSU proteome 0.39 LandPlants
Zm00001e018345_P001 No alias component RPS9 of SSU proteome 0.23 LandPlants
Zm00001e037961_P002 No alias component RPS9 of SSU proteome 0.21 LandPlants
AMTR_s00010p00256040 evm_27.TU.AmTr_v1... 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.02 SeedPlants
AT5G15200 No alias Ribosomal protein S4 0.35 SeedPlants
GSVIVT01008028001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.11 SeedPlants
GSVIVT01011384001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.25 SeedPlants
GSVIVT01020020001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.03 SeedPlants
Gb_19294 No alias component RPS9 of SSU proteome 0.02 SeedPlants
Gb_41315 No alias component RPS9 of SSU proteome 0.17 SeedPlants
MA_10429805g0030 No alias component RPS9 of SSU proteome 0.14 SeedPlants
MA_10431745g0020 No alias component RPS9 of SSU proteome 0.09 SeedPlants
Solyc01g010540.3.1 No alias component RPS9 of SSU proteome 0.21 SeedPlants
Solyc01g010580.3.1 No alias component RPS9 of SSU proteome 0.13 SeedPlants
Solyc04g005680.4.1 No alias component RPS9 of SSU proteome 0.25 SeedPlants
Zm00001e018345_P001 No alias component RPS9 of SSU proteome 0.23 SeedPlants
Zm00001e037961_P002 No alias component RPS9 of SSU proteome 0.21 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001912 Ribosomal_S4/S9_N 12 64
IPR002942 S4_RNA-bd 109 153
No external refs found!