LOC_Os11g38800.1


Description : RING-v-class E3 ligase


Gene families : OG_01_0000436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000436_tree ,
OG_02_0000506 (LandPlants) Phylogenetic Tree(s): OG_02_0000506_tree ,
OG_03_0001067 (SeedPlants) Phylogenetic Tree(s): OG_03_0001067_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g38800.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT3G47550 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Archaeplastida
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Archaeplastida
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01030910001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_37740 No alias RING-v-class E3 ligase 0.04 Archaeplastida
MA_10427291g0010 No alias RING-v-class E3 ligase 0.03 Archaeplastida
MA_10433939g0010 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Smo420592 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g010880.3.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Solyc01g020190.2.1 No alias Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis... 0.01 Archaeplastida
Solyc02g091230.4.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Solyc03g116030.4.1 No alias RING-v-class E3 ligase 0.05 Archaeplastida
Solyc06g069780.4.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Zm00001e009834_P004 No alias RING-v-class E3 ligase 0.04 Archaeplastida
Zm00001e021220_P001 No alias RING-v-class E3 ligase 0.07 Archaeplastida
Zm00001e025697_P001 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Zm00001e028572_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00010p00261170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT3G47550 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 LandPlants
GSVIVT01008001001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Gb_37740 No alias RING-v-class E3 ligase 0.04 LandPlants
MA_10433939g0010 No alias RING-v-class E3 ligase 0.02 LandPlants
Solyc01g010880.3.1 No alias RING-v-class E3 ligase 0.03 LandPlants
Solyc02g091230.4.1 No alias RING-v-class E3 ligase 0.02 LandPlants
Solyc03g116030.4.1 No alias RING-v-class E3 ligase 0.05 LandPlants
Solyc06g069780.4.1 No alias RING-v-class E3 ligase 0.03 LandPlants
Zm00001e009834_P004 No alias RING-v-class E3 ligase 0.04 LandPlants
Zm00001e021220_P001 No alias RING-v-class E3 ligase 0.07 LandPlants
Zm00001e025697_P001 No alias RING-v-class E3 ligase 0.02 LandPlants
AMTR_s00010p00261170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 SeedPlants
AT2G02960 No alias RING/FYVE/PHD zinc finger superfamily protein 0.01 SeedPlants
Gb_37740 No alias RING-v-class E3 ligase 0.02 SeedPlants
MA_10433939g0010 No alias RING-v-class E3 ligase 0.02 SeedPlants
Solyc01g010880.3.1 No alias RING-v-class E3 ligase 0.03 SeedPlants
Solyc03g116030.4.1 No alias RING-v-class E3 ligase 0.03 SeedPlants
Solyc06g069780.4.1 No alias RING-v-class E3 ligase 0.03 SeedPlants
Zm00001e009834_P004 No alias RING-v-class E3 ligase 0.04 SeedPlants
Zm00001e021220_P001 No alias RING-v-class E3 ligase 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 59 104
IPR022143 DUF3675 111 218
No external refs found!