Ppi_g34310 (ATUBC11, UBC11)

Aliases : ATUBC11, UBC11

Description : not classified & original description: none

Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g34310
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
Ceric.17G077500.1	UBC9, Ceric.17G077500	E2 MUB ubiquitin-conjugating enzyme & original...	0.03	OrthoFinder output from all 47 species
Ceric.23G049000.1	UBC9, Ceric.23G049000	E2 MUB ubiquitin-conjugating enzyme & original...	0.04	OrthoFinder output from all 47 species
LOC_Os02g16040.1	UBC10, LOC_Os02g16040	conjugation E2 protein	0.02	OrthoFinder output from all 47 species
Lfl_g18025	ATUBC8, UBC8	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Solyc06g007510.3.1	UBC10, Solyc06g007510	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Spa_g31608	UBC31	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g35317	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g36347	UBC3	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e019454_P001	ATUBC11, UBC11,...	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Zm00001e028859_P002	ATUBC11, UBC11,...	conjugation E2 protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007264	small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0007265	Ras protein signal transduction	IEP	HCCA
BP	GO:0007266	Rho protein signal transduction	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000608	UBQ-conjugat_E2	4	141
IPR000196	Ribosomal_L19/L19e	144	177

External Links

No external refs found!

Ppi_g34310 (ATUBC11, UBC11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation