1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g34065

Ppi_g34065


Description : component *(eL29) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0004690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004690_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g34065
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00034600 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s03807p00002720 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043647 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g68190 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.39G032900.1 Ceric.39G032900 component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre03.g207050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01035023001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Gb_37735 No alias component RPL29 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Mp1g23580.1 No alias component RPL29 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c14_7570V3.1 Pp3c14_7570 Ribosomal L29e protein family 0.03 OrthoFinder output from all 47 species
Pp3c1_34380V3.1 Pp3c1_34380 Ribosomal L29e protein family 0.03 OrthoFinder output from all 47 species
Ppi_g48757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo228166 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR002673 Ribosomal_L29e 1 37
No external refs found!