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  5. Ppi_g33628

Ppi_g33628 (LON_ARA_ARA, LON1)


Aliases : LON_ARA_ARA, LON1

Description : LON-type protease & original description: none


Gene families : OG0001871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001871_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g33628

Target Alias Description ECC score Gene Family Method Actions
Adi_g014214 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060199 LON2 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085048 LON2 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21678 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18702 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26888 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71901.t1 LON2, Aspi01Gene71901 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G051800.1 LON2, Ceric.33G051800 LON-type protease & original description: pacid=50606858... 0.03 OrthoFinder output from all 47 species
Dcu_g04119 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02940 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02290 LON2 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
MA_68108g0010 LON2 protease (LON) 0.02 OrthoFinder output from all 47 species
Ore_g33257 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25358 No alias LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g024320.2.1 LON_ARA_ARA,... protease (LON) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003111 Lon_prtase_N 178 395
IPR008269 Lon_proteolytic 1134 1275
IPR003959 ATPase_AAA_core 548 688
No external refs found!