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  5. Ppi_g33264

Ppi_g33264


Description : not classified & original description: none


Gene families : OG0006865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006865_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g33264
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00173820 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g17033... 0.02 OrthoFinder output from all 47 species
Adi_g012266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_166228g0010 No alias Pentatricopeptide repeat-containing protein At2g17033... 0.03 OrthoFinder output from all 47 species
Msp_g09318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013486_P002 Zm00001e013486 Pentatricopeptide repeat-containing protein At2g17033... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 235 280
IPR002885 Pentatricopeptide_repeat 168 194
No external refs found!