Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0003966 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0003966_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g32866 | |
Cluster | HCCA: Cluster_492 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cba_g06573 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 39 species | |
Len_g12939 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 39 species | |
Lfl_g14377 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 39 species | |
Msp_g21545 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 39 species | |
Ppi_g53170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 39 species | |
Ppi_g61143 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 39 species | |
Spa_g15589 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 39 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 412 | 437 |
IPR002885 | Pentatricopeptide_repeat | 383 | 407 |
IPR002885 | Pentatricopeptide_repeat | 282 | 306 |
IPR002885 | Pentatricopeptide_repeat | 309 | 355 |
IPR002885 | Pentatricopeptide_repeat | 206 | 255 |
IPR002885 | Pentatricopeptide_repeat | 4 | 52 |
IPR002885 | Pentatricopeptide_repeat | 106 | 152 |
No external refs found! |