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  5. Ppi_g32866

Ppi_g32866 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0003966 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0003966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g32866
Cluster HCCA: Cluster_492

Target Alias Description ECC score Gene Family Method Actions
Cba_g06573 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Len_g12939 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Lfl_g14377 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Msp_g21545 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Ppi_g53170 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Ppi_g61143 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Spa_g15589 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 412 437
IPR002885 Pentatricopeptide_repeat 383 407
IPR002885 Pentatricopeptide_repeat 282 306
IPR002885 Pentatricopeptide_repeat 309 355
IPR002885 Pentatricopeptide_repeat 206 255
IPR002885 Pentatricopeptide_repeat 4 52
IPR002885 Pentatricopeptide_repeat 106 152
No external refs found!