Zm00001d029996 (GRMZM2G042538)


Aliases : GRMZM2G042538

Description : No description available


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d029996
Cluster HCCA cluster: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT2G17450 RHA3A RING-H2 finger A3A 0.03 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G44578 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G18930 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G62690 ATL5 AtL5 0.02 Gene family
AT4G35480 RHA3B RING-H2 finger A3B 0.02 Gene family
AT4G35840 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G38140 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G05280 No alias RING/U-box superfamily protein 0.04 Gene family
AT5G06490 No alias RING/U-box superfamily protein 0.05 Gene family
AT5G42200 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G43420 No alias RING/U-box superfamily protein 0.03 Gene family
Cre01.g051700 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
GSVIVT01024698001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01028038001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
GSVIVT01028306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os02g43120 Os02g0645000 No description available 0.04 Gene family
LOC_Os02g46340 Os02g0688800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os02g46600 Os02g0692000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os05g45060 Os05g0526600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os12g24490 Os12g0432600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.02 Gene family
LOC_Os12g40460 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10260361g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436208g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_129306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_181142g0010 No alias No description available 0.02 Gene family
MA_184439g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_19072g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_214717g0010 No alias No description available 0.02 Gene family
MA_31462g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_42543g0010 No alias No description available 0.02 Gene family
MA_61349g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_634100g0010 No alias No description available 0.01 Gene family
MA_78643g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_786911g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_85088g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_92848g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo39820 PACid_15420975 No description available 0.04 Gene family
Smo8844 PACid_15408158 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Smo96681 PACid_15409405 No description available 0.01 Gene family
Solyc01g081040.3.1 Solyc01g081040.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc04g014220.1.1 Solyc04g014220.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc04g074820.2.1 Solyc04g074820.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc08g076830.1.1 Solyc08g076830.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc09g075320.1.1 Solyc09g075320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc10g081780.2.1 Solyc10g081780.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc11g005320.1.1 Solyc11g005320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc12g005020.2.1 Solyc12g005020.2 35.1 not assigned.no ontology RING/U-box superfamily protein 0.01 Gene family
Solyc12g094690.1.1 Solyc12g094690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.05 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d003575 GRMZM2G028543 No description available 0.01 Gene family
Zm00001d016721 GRMZM2G451308 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d017645 GRMZM2G057789 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Zm00001d017923 No alias No description available 0.03 Gene family
Zm00001d018028 GRMZM2G140651 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d021316 GRMZM2G449875 No description available 0.01 Gene family
Zm00001d029806 GRMZM2G052344 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d031880 No alias No description available 0.03 Gene family
Zm00001d037095 GRMZM2G416750 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d037533 GRMZM2G021796 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d038420 GRMZM2G075782 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d038766 GRMZM2G482046 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d047068 GRMZM2G368765 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 154 197
No external refs found!