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  5. Ppi_g32695

Ppi_g32695 (LBD38)


Aliases : LBD38

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g32695

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00088960 LBD41,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AT1G68510 LBD42 LOB domain-containing protein 42 0.02 OrthoFinder output from all 47 species
Adi_g048099 LBD39 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082772 LBD37, ASL39 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086054 LBD38 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01892 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51765 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G017400.1 LBD38, Ceric.08G017400 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01009360001 LBD38 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
GSVIVT01011896001 LBD42 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
LOC_Os01g03890.1 LBD41, LOC_Os01g03890 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g32770.1 LBD41, LOC_Os01g32770 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g33090.1 LOC_Os03g33090 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g41330.1 LBD37, ASL39,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_91369g0010 LBD40 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Pp3c16_1150V3.1 LBD37, ASL39, Pp3c16_1150 LOB domain-containing protein 37 0.02 OrthoFinder output from all 47 species
Tin_g10767 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017028_P001 LBD40, Zm00001e017028 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 11 109
No external refs found!