Aliases : STH
Description : BBX class-IV transcription factor & original description: none
Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g32526 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os04g41560.2 | STO, LOC_Os04g41560 | transcription factor (BBX-DBB) | 0.02 | OrthoFinder output from all 47 species | |
Len_g31145 | STH | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g02898 | No alias | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g00412 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo111647 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e031265_P001 | LZF1, STH3,... | transcription factor (BBX-DBB) | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005730 | nucleolus | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
MF | GO:0008134 | transcription factor binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009605 | response to external stimulus | IEP | HCCA |
BP | GO:0009606 | tropism | IEP | HCCA |
MF | GO:0010181 | FMN binding | IEP | HCCA |
BP | GO:0010274 | hydrotropism | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
BP | GO:0031179 | peptide modification | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000315 | Znf_B-box | 53 | 94 |
No external refs found! |