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  5. Ppi_g32310

Ppi_g32310


Description : substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001985 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001985_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g32310

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00187100 MEE11,... F-box protein SKIP28 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G01620 MEE11 RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g18995 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene68042.t1 Aspi01Gene68042 substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dde_g04796 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Mp4g12870.1 No alias F-box protein SKIP28 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g02384 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005650 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Sam_g52066 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc01g005450.3.1 MEE11, Solyc01g005450 F-box protein SKIP28 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g11805 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!