Ppi_g32253


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g32253
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s03531p00004900 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
AT3G49740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G06540 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g008649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036683 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059043 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080049 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083433 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g097074 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1835.g107332 CRR22 not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Cba_g02684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.02 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.02 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.02 OrthoFinder output from all 47 species
Dac_g27799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28556 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07457 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10089 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02867 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38043 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39331 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17070 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19088 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g116840.3.1 Solyc03g116840 RNA editing factor (OTP81) 0.02 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15290 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55586 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06622 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 106 154
IPR002885 Pentatricopeptide_repeat 610 656
IPR002885 Pentatricopeptide_repeat 409 457
IPR002885 Pentatricopeptide_repeat 511 556
IPR002885 Pentatricopeptide_repeat 307 354
IPR002885 Pentatricopeptide_repeat 484 509
IPR002885 Pentatricopeptide_repeat 181 201
IPR002885 Pentatricopeptide_repeat 80 103
IPR002885 Pentatricopeptide_repeat 282 302
IPR002885 Pentatricopeptide_repeat 678 706
IPR002885 Pentatricopeptide_repeat 207 255
No external refs found!