Ppi_g32102 (TOZ)

Aliases : TOZ

Description : SSU processome assembly factor *(TOZ) & original description: none

Gene families : OG0004926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004926_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g32102

Target	Alias	Description	ECC score	Gene Family Method
Cre07.g344050	TOZ	Protein biosynthesis.cytosolic ribosome.small subunit...	0.01	OrthoFinder output from all 47 species
MA_10601g0020	TOZ	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp8g08070.1	TOZ	SSU processome assembly factor (TOZ)	0.02	OrthoFinder output from all 47 species
Msp_g13701	TOZ	SSU processome assembly factor *(TOZ) & original...	0.04	OrthoFinder output from all 47 species
Ore_g36827	TOZ	SSU processome assembly factor *(TOZ) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e007090_P001	TOZ, Zm00001e007090	SSU processome assembly factor (TOZ)	0.02	OrthoFinder output from all 47 species
Zm00001e041546_P002	TOZ, Zm00001e041546	SSU processome assembly factor (TOZ)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
CC	GO:0030684	preribosome	None	Extended
CC	GO:0032040	small-subunit processome	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	443	480
IPR001680	WD40_repeat	399	438
IPR001680	WD40_repeat	501	535
IPR001680	WD40_repeat	104	141
IPR001680	WD40_repeat	544	576
IPR001680	WD40_repeat	581	618
IPR001680	WD40_repeat	624	660
IPR001680	WD40_repeat	146	185
IPR001680	WD40_repeat	190	227
IPR001680	WD40_repeat	66	98
IPR013934	Utp13_C	682	816

External Links

No external refs found!