Zm00001d029896 (GRMZM2G113098)


Aliases : GRMZM2G113098

Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 2 (GATA2)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d029896
Cluster HCCA cluster: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AT2G45050 GATA2 GATA transcription factor 2 0.04 Gene family
AT3G60530 GATA4 GATA transcription factor 4 0.02 Gene family
AT4G26150 GATA22, CGA1, GNL cytokinin-responsive gata factor 1 0.03 Gene family
AT4G32890 GATA9 GATA transcription factor 9 0.06 Gene family
AT5G25830 GATA12 GATA transcription factor 12 0.03 Gene family
AT5G56860 GNC, GATA21 GATA type zinc finger transcription factor family protein 0.04 Gene family
GSVIVT01017011001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
GSVIVT01033385001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
GSVIVT01035614001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
LOC_Os01g47360 Os01g0662800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os02g43150 Os02g0645600 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os02g56250 Os02g0806300,... 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os05g44400 Os05g0520300 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
LOC_Os05g49280 Os05g0567900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
LOC_Os05g50270 Os05g0578900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os10g32070 Os10g0458800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os10g40810 Os10g0557600 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
LOC_Os12g07120 Os12g0168800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os12g42970 Os12g0624900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_10434815g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Solyc03g033660.3.1 Solyc03g033660.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Solyc04g015360.3.1 Solyc04g015360.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc08g066510.3.1 Solyc08g066510.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Solyc10g018560.2.1 Solyc10g018560.2 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d025953 GRMZM2G054615 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d043969 GRMZM2G123909 No description available 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 261 294
No external refs found!