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  5. Ppi_g31866

Ppi_g31866 (TRFL5)


Aliases : TRFL5

Description : telomeric dsDNA-binding protein & original description: none


Gene families : OG0003619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003619_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g31866

Target Alias Description ECC score Gene Family Method Actions
AT1G15720 TRFL5 TRF-like 5 0.02 OrthoFinder output from all 47 species
AT5G58340 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
Adi_g081475 ATTRB3, TBP2, TRB3 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g00360.1 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Solyc06g082510.3.1 Solyc06g082510 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e030143_P001 TRFL8, Zm00001e030143 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 700 748
No external refs found!