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  5. Aev_g11111

Aev_g11111 (WLIM1)


Aliases : WLIM1

Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g11111
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00121090 WLIM1,... RNA biosynthesis.transcriptional activation.LIM... 0.02 OrthoFinder output from all 47 species
AT3G55770 No alias GATA type zinc finger transcription factor family protein 0.02 OrthoFinder output from all 47 species
Als_g04744 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27190 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06316 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20782 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39322 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03324 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026849001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.01 OrthoFinder output from all 47 species
LOC_Os04g45010.1 LOC_Os04g45010 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
MA_104604g0010 WLIM1 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Nbi_g08756 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03350 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 113 168
IPR001781 Znf_LIM 10 64
No external refs found!