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  5. Ppi_g31479

Ppi_g31479


Description : methionine-tRNA ligase & original description: none


Gene families : OG0005969 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g31479

Target Alias Description ECC score Gene Family Method Actions
AT2G40660 No alias Nucleic acid-binding, OB-fold-like protein 0.02 OrthoFinder output from all 47 species
Adi_g017269 No alias methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0352.g066604 No alias methionine-tRNA ligase & original description: CDS=165-1472 0.04 OrthoFinder output from all 47 species
Dde_g07746 No alias methionine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436848g0010 No alias methionine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Zm00001e028847_P003 Zm00001e028847 methionine-tRNA ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 262 356
No external refs found!