Ppi_g31276 (emb2768)

Aliases : emb2768

Description : organellar tyrosine-tRNA ligase & original description: none

Gene families : OG0006788 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006788_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g31276
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g31610.1	emb2768, LOC_Os01g31610	tyrosine-tRNA ligase	0.03	OrthoFinder output from all 47 species
Smo111886	emb2768	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
Zm00001e007916_P001	emb2768, Zm00001e007916	tyrosine-tRNA ligase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002305	aa-tRNA-synth_Ic	103	451
IPR002942	S4_RNA-bd	486	532

External Links

No external refs found!