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  5. Aev_g11042

Aev_g11042


Description : component *(BRAT1) of anti-silencing regulator complex & original description: none


Gene families : OG0001881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001881_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g11042

Target Alias Description ECC score Gene Family Method Actions
Adi_g060029 No alias component *(BRAT1) of anti-silencing regulator complex &... 0.03 OrthoFinder output from all 47 species
Ala_g18310 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010210 No alias component *(BRAT1) of anti-silencing regulator complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001042.14 No alias ATPase family AAA domain-containing protein At1g05910... 0.01 OrthoFinder output from all 47 species
Cre01.g038151 No alias ATPase family AAA domain-containing protein At1g05910... 0.02 OrthoFinder output from all 47 species
Dcu_g04982 No alias component *(BRAT1) of anti-silencing regulator complex &... 0.03 OrthoFinder output from all 47 species
Gb_11471 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.02 OrthoFinder output from all 47 species
LOC_Os09g33980.1 LOC_Os09g33980 ATPase family AAA domain-containing protein At1g05910... 0.02 OrthoFinder output from all 47 species
MA_10425878g0020 No alias ATPase family AAA domain-containing protein At1g05910... 0.03 OrthoFinder output from all 47 species
Mp2g00420.1 No alias ATPase family AAA domain-containing protein At1g05910... 0.02 OrthoFinder output from all 47 species
Ore_g33221 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Solyc07g062770.2.1 Solyc07g062770 component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.03 OrthoFinder output from all 47 species
Spa_g08442 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Spa_g26513 No alias component *(BRAT1) of anti-silencing regulator complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 558 594
IPR001487 Bromodomain 893 966
IPR003959 ATPase_AAA_core 395 529
No external refs found!