Zm00001d029679 (GRMZM2G477287)


Aliases : GRMZM2G477287

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d029679
Cluster HCCA cluster: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 Gene family
AT1G68550 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G14230 RAP2.2 related to AP2 2 0.04 Gene family
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G60490 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.03 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.02 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.02 Gene family
AT5G61600 ERF104 ethylene response factor 104 0.03 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.03 Gene family
Cre08.g364400 No alias No description available 0.01 Gene family
GSVIVT01001089001 No alias No description available 0.02 Gene family
GSVIVT01006277001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
GSVIVT01008649001 No alias No description available 0.03 Gene family
GSVIVT01013918001 No alias No description available 0.04 Gene family
GSVIVT01021098001 No alias No description available 0.03 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01035098001 No alias No description available 0.03 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os01g07120 Os01g0165000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.07 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.04 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.05 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g34970 Os04g0429050 No description available 0.02 Gene family
LOC_Os05g25260 Os05g0316800 No description available 0.02 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.09 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.05 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
MA_10031781g0010 No alias No description available 0.03 Gene family
MA_116185g0010 No alias No description available 0.04 Gene family
MA_162045g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_168025g0010 No alias No description available 0.03 Gene family
MA_203191g0010 No alias No description available 0.03 Gene family
MA_269802g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_3073g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_3405g0010 No alias No description available 0.05 Gene family
MA_4032g0010 No alias No description available 0.03 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_446533g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_6447416g0010 No alias No description available 0.02 Gene family
MA_77420g0010 No alias No description available 0.02 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_9260020g0010 No alias No description available 0.02 Gene family
MA_96512g0020 No alias No description available 0.03 Gene family
Smo104980 PACid_15415938 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Smo73155 PACid_15404551 No description available 0.03 Gene family
Solyc01g065980.3.1 Solyc01g065980.3 No description available 0.05 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.05 Gene family
Solyc01g090320.3.1 Solyc01g090320.3 No description available 0.03 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.03 Gene family
Solyc02g090770.1.1 Solyc02g090770.1 No description available 0.02 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.05 Gene family
Solyc03g093550.1.1 Solyc03g093550.1 No description available 0.02 Gene family
Solyc03g093560.1.1 Solyc03g093560.1 No description available 0.03 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.02 Gene family
Solyc03g118190.3.1 Solyc03g118190.3 No description available 0.02 Gene family
Solyc04g012050.3.1 Solyc04g012050.3 No description available 0.04 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.05 Gene family
Solyc04g072300.1.1 Solyc04g072300.1 No description available 0.04 Gene family
Solyc04g072900.1.1 Solyc04g072900.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.03 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc09g066360.1.1 Solyc09g066360.1 No description available 0.04 Gene family
Solyc11g045690.2.1 Solyc11g045690.2 No description available 0.02 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g049560.2.1 Solyc12g049560.2 No description available 0.03 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.02 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d003871 GRMZM2G079825 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d005309 No alias No description available 0.04 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d014113 GRMZM2G024871 17.5.3 hormone... 0.03 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Zm00001d017366 GRMZM2G139765 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
Zm00001d017477 GRMZM5G842961 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d017478 GRMZM2G041839 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d018305 GRMZM2G110333 No description available 0.04 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.03 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.03 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d026447 GRMZM2G421033 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d036251 GRMZM2G328197 No description available 0.04 Gene family
Zm00001d037941 GRMZM2G085964 No description available 0.03 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.03 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d048208 GRMZM2G113060 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d049058 GRMZM2G073258,... No description available 0.03 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d051340 GRMZM2G319786 No description available 0.04 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.07 Gene family
Zm00001d052102 GRMZM2G097081 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052365 GRMZM2G060465 No description available 0.03 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.03 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 29 78
No external refs found!