Aliases : GRF3, AtGRF3
Description : not classified & original description: none
Gene families : OG0000528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000528_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g30072 | |
Cluster | HCCA: Cluster_14 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00040p00189460 | GRF4, AtGRF4,... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00065p00092420 | GRF1, AtGRF1,... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00069p00196720 | GRF1, AtGRF1,... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | OrthoFinder output from all 47 species | |
AT2G06200 | GRF6, AtGRF6 | growth-regulating factor 6 | 0.03 | OrthoFinder output from all 47 species | |
AT2G36400 | GRF3, AtGRF3 | growth-regulating factor 3 | 0.04 | OrthoFinder output from all 47 species | |
AT3G13960 | GRF5, AtGRF5 | growth-regulating factor 5 | 0.03 | OrthoFinder output from all 47 species | |
AT3G52910 | GRF4, AtGRF4 | growth-regulating factor 4 | 0.05 | OrthoFinder output from all 47 species | |
AT5G53660 | AtGRF7, GRF7 | growth-regulating factor 7 | 0.04 | OrthoFinder output from all 47 species | |
Ala_g04374 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g10136 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g13520 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.05 | OrthoFinder output from all 47 species | |
Als_g16124 | GRF5, AtGRF5 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g07031 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g11516 | GRF5, AtGRF5 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene47276.t1 | GRF1, AtGRF1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene68335.t1 | GRF1, AtGRF1,... | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene72796.t2 | GRF2, AtGRF2,... | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0256.g060519 | GRF5, AtGRF5 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g07600 | GRF1, AtGRF1 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g30750 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.15G044200.1 | GRF3, AtGRF3,... | component *(GRF) of GRF-GIF transcriptional complex &... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.19G047800.1 | GRF2, AtGRF2,... | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.36G051200.1 | GRF5, AtGRF5,... | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g38973 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g12992 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g26378 | GRF1, AtGRF1 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01015095001 | GRF5, AtGRF5 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01016762001 | GRF5, AtGRF5 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01019667001 | AtGRF8, GRF8 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01019913001 | GRF3, AtGRF3 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01024326001 | GRF5, AtGRF5 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01033800001 | GRF3, AtGRF3 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g53690.1 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g51970.1 | GRF1, AtGRF1,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g29980.1 | GRF2, AtGRF2,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
Len_g10947 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.02 | OrthoFinder output from all 47 species | |
Len_g15450 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.02 | OrthoFinder output from all 47 species | |
Len_g36054 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Len_g36239 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.05 | OrthoFinder output from all 47 species | |
MA_18836g0010 | GRF5, AtGRF5 | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
MA_33661g0010 | GRF1, AtGRF1 | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
MA_88101g0010 | GRF1, AtGRF1 | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g07300 | GRF5, AtGRF5 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g63627 | GRF1, AtGRF1 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002301 | GRF5, AtGRF5 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0035.g011382 | No alias | not classified & original description: CDS=103-1059 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0035.g011385 | GRF1, AtGRF1 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0120.g021398 | GRF4, AtGRF4 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0161.g023900 | GRF5, AtGRF5 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.04 | OrthoFinder output from all 47 species | |
Smo412762 | GRF2, AtGRF2 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | OrthoFinder output from all 47 species | |
Smo442384 | GRF5, AtGRF5 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g091540.3.1 | GRF9, AtGRF9,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g082430.1.1 | AtGRF7, GRF7,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g041640.3.1 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g005430.3.1 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g083510.2.1 | GRF3, AtGRF3,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
Spa_g33786 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g48274 | GRF5, AtGRF5 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g45753 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e015561_P002 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e023769_P003 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029851_P005 | GRF3, AtGRF3,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030774_P001 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e036224_P001 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0004097 | catechol oxidase activity | IEP | HCCA |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
CC | GO:0005886 | plasma membrane | IEP | HCCA |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0006952 | defense response | IEP | HCCA |
MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
No external refs found! |