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  5. Ppi_g29933

Ppi_g29933 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g29933

Target Alias Description ECC score Gene Family Method Actions
Aev_g39266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58555 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22269 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39298 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g33385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38699 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06746 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g112750.4.1 LOP1, TRN1,... Protein TORNADO 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 259 276
IPR001611 Leu-rich_rpt 231 250
No external refs found!