Ppi_g29710 (EMB2261)


Aliases : EMB2261

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g29710
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g002450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g025491 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096184 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099198 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111214 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17904 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46730 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36515 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04456 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18669 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23786 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16353.t1 Aspi01Gene16353 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18986.t1 MEF21, Aspi01Gene18986 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34731.t1 Aspi01Gene34731 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49892.t2 Aspi01Gene49892 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024956 No alias not classified & original description: CDS=109-3012 0.03 OrthoFinder output from all 47 species
Azfi_s0503.g073910 No alias not classified & original description: CDS=59-2179 0.03 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Len_g19878 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g08590 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20613 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07471 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19959 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03406 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63492 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04516 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05183 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12943 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32073 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004036 OTP84 not classified & original description: CDS=1-1773 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005856 No alias not classified & original description: CDS=1-2292 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016873 No alias not classified & original description: CDS=1-2589 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017029 No alias not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018323 No alias not classified & original description: CDS=1-1728 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019336 No alias not classified & original description: CDS=1-1245 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019387 REME1 not classified & original description: CDS=1-1161 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019669 OTP84 not classified & original description: CDS=1-1971 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020215 No alias not classified & original description: CDS=1-5316 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023714 No alias not classified & original description: CDS=1-2772 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025546 No alias not classified & original description: CDS=1-3414 0.02 OrthoFinder output from all 47 species
Sam_g29135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo70138 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo76916 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Smo81625 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Spa_g03178 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14318 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20467 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 127 151
IPR002885 Pentatricopeptide_repeat 98 115
No external refs found!