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  5. Ppi_g29187

Ppi_g29187


Description : not classified & original description: none


Gene families : OG0003128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g29187

Target Alias Description ECC score Gene Family Method Actions
Adi_g016660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28656 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16621.t1 Aspi01Gene16621 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene18905.t1 Aspi01Gene18905 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21762.t1 Aspi01Gene21762 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32842.t1 Aspi01Gene32842 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene45716.t1 Aspi01Gene45716 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52708.t1 Aspi01Gene52708 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54235.t1 Aspi01Gene54235 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene64955.t1 Aspi01Gene64955 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g61696 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g14596 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g42591 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g16489 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g43741 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g13904 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ppi_g52704 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ppi_g63122 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!