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  5. Ppi_g29056

Ppi_g29056


Description : not classified & original description: none


Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g29056

Target Alias Description ECC score Gene Family Method Actions
Adi_g041557 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.02 OrthoFinder output from all 47 species
Adi_g067157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012219001 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.02 OrthoFinder output from all 47 species
Lfl_g02279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_743669g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 OrthoFinder output from all 47 species
MA_90791g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc01g088750.3.1 Solyc01g088750 Pentatricopeptide repeat-containing protein At1g69290... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 436 482
IPR002885 Pentatricopeptide_repeat 523 551
IPR002885 Pentatricopeptide_repeat 214 239
No external refs found!