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  5. Ppi_g28700

Ppi_g28700 (ATRBP47C', RBP47C')


Aliases : ATRBP47C', RBP47C'

Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g28700
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Mp1g21200.1 GRP2, ATGRP2, GR-RBP2 RNA editing factor (ORRM) 0.01 OrthoFinder output from all 47 species
Msp_g32974 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39437 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g33631 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43693 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g34372 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028481_P002 GRP2, ATGRP2,... RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008810 cellulase activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 126 189
IPR000504 RRM_dom 215 281
No external refs found!