1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g27971

Ppi_g27971 (P40, AP40, RPSAA, RP40)


Aliases : P40, AP40, RPSAA, RP40

Description : component *(uS2) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g27971
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G72370 P40, AP40, RPSAA, RP40 40s ribosomal protein SA 0.02 OrthoFinder output from all 47 species
Adi_g127034 P40, AP40, RPSAA, RP40 component *(uS2) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g07397 P40, AP40, RPSAA, RP40 component *(uS2) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.38G026900.1 P40, AP40,... component *(uS2) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cre10.g432800 P40, AP40, RPSAA, RP40 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os07g42450.1 P40, AP40,... component RPSa of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp2g26290.1 P40, AP40, RPSAA, RP40 component RPSa of SSU proteome 0.03 OrthoFinder output from all 47 species
Msp_g20402 P40, AP40, RPSAA, RP40 component *(uS2) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c14_15700V3.1 P40, AP40,... 40s ribosomal protein SA B 0.02 OrthoFinder output from all 47 species
Pp3c17_17600V3.1 P40, AP40,... 40s ribosomal protein SA 0.02 OrthoFinder output from all 47 species
Ppi_g10537 P40, AP40, RPSAA, RP40 component *(uS2) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g42338 No alias component *(uS2) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc03g019780.4.1 P40, AP40,... component RPSa of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc06g072120.3.1 P40, AP40,... component RPSa of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e010780_P001 P40, AP40,... component RPSa of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e038933_P001 P40, AP40,... component RPSa of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 23 116
IPR001865 Ribosomal_S2 122 187
No external refs found!