LOC_Os11g26910.1


Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes


Gene families : OG_01_0000418 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000418_tree ,
OG_02_0000338 (LandPlants) Phylogenetic Tree(s): OG_02_0000338_tree ,
OG_03_0000762 (SeedPlants) Phylogenetic Tree(s): OG_03_0000762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g26910.1
Cluster HCCA: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00153350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Cre12.g501200 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01009967001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
MA_10428641g0010 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
Pp3c23_19260V3.1 No alias SKP1-like 4 0.04 Archaeplastida
Solyc01g111650.3.1 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
AMTR_s00029p00153350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01009967001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
MA_10428641g0010 No alias target protein binding component SKP1/ASK1 of... 0.02 LandPlants
MA_82940g0020 No alias target protein binding component SKP1/ASK1 of... 0.02 LandPlants
Mp3g00120.1 No alias target protein binding component SKP1/ASK1 of... 0.02 LandPlants
Pp3c23_19260V3.1 No alias SKP1-like 4 0.04 LandPlants
Solyc01g111650.3.1 No alias target protein binding component SKP1/ASK1 of... 0.03 LandPlants
AMTR_s00029p00153350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 SeedPlants
MA_10428641g0010 No alias target protein binding component SKP1/ASK1 of... 0.02 SeedPlants
MA_134599g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_82940g0020 No alias target protein binding component SKP1/ASK1 of... 0.02 SeedPlants
Solyc01g111650.3.1 No alias target protein binding component SKP1/ASK1 of... 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 8 67
IPR016072 Skp1_comp_dimer 124 171
No external refs found!