Ppi_g26533

Description : component *(eL15) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0002002 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g26533
Cluster	HCCA: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
AT4G16720	No alias	Ribosomal protein L23/L15e family protein	0.02	OrthoFinder output from all 47 species
AT4G17390	No alias	Ribosomal protein L23/L15e family protein	0.03	OrthoFinder output from all 47 species
Azfi_s0148.g053106	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dac_g12320	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g36045	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01007404001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Gb_36986	No alias	component RPL15 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os03g40180.1	LOC_Os03g40180	component RPL15 of LSU proteome component	0.02	OrthoFinder output from all 47 species
LOC_Os05g19370.1	LOC_Os05g19370	component RPL15 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_29804g0010	No alias	component RPL15 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Pir_g30101	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pp3c17_22180V3.1	Pp3c17_22180	Ribosomal protein L23/L15e family protein	0.03	OrthoFinder output from all 47 species
Sam_g42941	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Solyc04g008460.4.1	Solyc04g008460	component RPL15 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Solyc06g060400.3.1	Solyc06g060400	component RPL15 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Solyc06g064630.3.1	Solyc06g064630	component RPL15 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g26061	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e010380_P001	Zm00001e010380	component RPL15 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e032897_P001	Zm00001e032897	component RPL15 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e034995_P001	Zm00001e034995	component RPL15 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e034996_P001	Zm00001e034996	component RPL15 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006020	inositol metabolic process	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
BP	GO:0006672	ceramide metabolic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019310	inositol catabolic process	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0046164	alcohol catabolic process	IEP	HCCA
BP	GO:0046174	polyol catabolic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0050113	inositol oxygenase activity	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000439	Ribosomal_L15e	2	191

External Links

No external refs found!

Ppi_g26533

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation